SNP Report
Name | rs73907947   dbSNP |
---|---|
Location | chr:20,44044094 |
Allele | C/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs2231615 | 1.00[AMR][1000 genomes] |
rs2231622 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2231627 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs55767946 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs56367627 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs57342479 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs60958897 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73907924 | 0.80[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73907925 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73907926 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73907927 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73907928 | 1.00[AMR][1000 genomes] |
rs73907933 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73907939 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73907940 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73907941 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73907943 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73907948 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
PIGT | Proximal transcriptional regulation |
SYS1 | Distal transcriptional regulation |
SYS1-DBNDD2 | Distal transcriptional regulation |
TP53TG5 | Distal transcriptional regulation |
TRIM8 | Distal transcriptional regulation |
SDC4 | Distal transcriptional regulation |
ENSG00000234011 | Distal transcriptional regulation |
WFDC2 | Distal transcriptional regulation |
ENSG00000232135 | Distal transcriptional regulation |
WFDC6 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014