SNP Report
Basic Infomation
| Name | rs2231615 dbSNP |
|---|---|
| Location | chr:20,44005990 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 19)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs2231622 | 1.00[AMR][1000 genomes] |
| rs2231627 | 0.88[YRI][hapmap];1.00[AMR][1000 genomes] |
| rs4812891 | 1.00[ASW][hapmap] |
| rs55767946 | 1.00[AMR][1000 genomes] |
| rs56367627 | 1.00[AMR][1000 genomes] |
| rs57342479 | 1.00[AMR][1000 genomes] |
| rs60958897 | 1.00[AMR][1000 genomes] |
| rs73907924 | 1.00[AMR][1000 genomes] |
| rs73907925 | 1.00[AMR][1000 genomes] |
| rs73907926 | 1.00[AMR][1000 genomes] |
| rs73907927 | 1.00[AMR][1000 genomes] |
| rs73907928 | 1.00[AMR][1000 genomes] |
| rs73907933 | 1.00[AMR][1000 genomes] |
| rs73907939 | 1.00[AMR][1000 genomes] |
| rs73907940 | 1.00[AMR][1000 genomes] |
| rs73907941 | 1.00[AMR][1000 genomes] |
| rs73907943 | 1.00[AMR][1000 genomes] |
| rs73907947 | 1.00[AMR][1000 genomes] |
| rs73907948 | 1.00[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| DBNDD2 | Distal transcriptional regulation |
| TP53TG5 | Distal transcriptional regulation |
| SYS1-DBNDD2 | RNA binding protein mediated regulation |
| TP53TG5 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014