SNP Report

Basic Infomation

Name	rs738128 dbSNP
Location	chr:22,21971010
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 82)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1034329	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11089620	0.80[EUR][1000 genomes]
rs11089629	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11089637	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12158299	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12484550	0.85[EUR][1000 genomes]
rs131656	0.85[EUR][1000 genomes]
rs131657	0.82[EUR][1000 genomes]
rs131658	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs131660	0.81[AMR][1000 genomes]
rs131664	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs131665	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs140488	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs140489	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs140490	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs140491	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs140492	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs140498	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs140499	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1811069	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs181359	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs181360	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs181361	0.85[EUR][1000 genomes]
rs181363	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs181366	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2070512	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2266959	0.80[EUR][1000 genomes]
rs2266961	0.80[EUR][1000 genomes]
rs2266963	0.85[EUR][1000 genomes]
rs2266964	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2283789	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2283790	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2298428	0.83[EUR][1000 genomes]
rs2298429	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2876971	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3747093	0.83[ASN][1000 genomes]
rs4820091	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4821104	0.87[EUR][1000 genomes]
rs4821108	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4821112	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4821114	0.88[EUR][1000 genomes]
rs4821116	0.87[EUR][1000 genomes]
rs4821124	0.88[EUR][1000 genomes]
rs4821130	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs5749485	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs5749493	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs5749495	0.85[EUR][1000 genomes]
rs5749502	0.85[EUR][1000 genomes]
rs5754166	0.80[EUR][1000 genomes]
rs5754217	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs5754234	0.85[EUR][1000 genomes]
rs5754238	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs5754295	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs5754323	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs5754344	0.88[EUR][1000 genomes]
rs5754352	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs5754422	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs5754426	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs5754467	0.83[ASN][1000 genomes]
rs59391722	0.80[EUR][1000 genomes]
rs5994638	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs5998576	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs5998599	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs5998619	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs5998644	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs5998672	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs66534072	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs710177	0.82[ASN][1000 genomes]
rs73166619	0.80[EUR][1000 genomes]
rs73166622	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73166630	0.84[EUR][1000 genomes]
rs73166632	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs738127	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs738129	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7444	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7445	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8137950	0.84[EUR][1000 genomes]
rs8139079	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs861857	0.81[ASN][1000 genomes]
rs878825	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9619386	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9621715	0.85[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
UBE2L3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)