SNP Report
Name | rs73297163   dbSNP |
---|---|
Location | chr:12,48373055 |
Allele | C/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1793947 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs41272027 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs41272035 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs41272745 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs41272751 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs41272757 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs41272761 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs56265470 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs56387272 | 0.85[AFR][1000 genomes] |
rs57444859 | 0.85[AFR][1000 genomes] |
rs57550917 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs58279970 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs58431786 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs58783688 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73297147 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73297150 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73297159 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73297161 | 0.87[AFR][1000 genomes] |
rs74086446 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs74086449 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs74088779 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
COL2A1 | Proximal transcriptional regulation |
COL2A1 | Distal transcriptional regulation |
COL2A1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014