SNP Report

Basic Infomation

Name	rs72894023 dbSNP
Location	chr:1,1125774
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 27)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11466678	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11466679	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11466681	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11466698	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2298209	0.84[ASN][1000 genomes]
rs2298210	0.84[ASN][1000 genomes]
rs2298213	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35107976	0.82[ASN][1000 genomes]
rs35737009	0.81[ASN][1000 genomes]
rs3753344	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3753346	0.87[EUR][1000 genomes]
rs3753347	0.83[ASN][1000 genomes]
rs3813205	0.80[ASN][1000 genomes]
rs3819001	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4081335	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs57260149	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs58004717	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58737594	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58980341	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59574701	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60075996	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60952966	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72894031	0.96[ASN][1000 genomes]
rs7544660	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9727211	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9727406	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9730380	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
TTLL10	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)