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rVarBase
SNP Report
Basic Infomation
Name
rs72775768  
dbSNP
Location
chr:9,139324574
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10870172
0.81[ASN][1000 genomes]
rs11145974
0.81[ASN][1000 genomes]
rs11145986
0.81[ASN][1000 genomes]
rs11146021
0.86[ASN][1000 genomes]
rs1130640
0.81[ASN][1000 genomes]
rs33982662
0.86[ASN][1000 genomes]
rs34302850
0.89[ASN][1000 genomes]
rs34936112
0.91[ASN][1000 genomes]
rs34985258
0.86[ASN][1000 genomes]
rs35531907
0.86[ASN][1000 genomes]
rs35873563
0.83[ASN][1000 genomes]
rs3923776
0.83[ASN][1000 genomes]
rs4413892
0.86[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
SEC16A
Distal transcriptional regulation
INPP5E
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)