Home
Search
List search
Advanced Search
Data content
Tutorial
About Us
Feedback
rVarBase
SNP Report
Basic Infomation
Name
rs7270170  
dbSNP
Location
chr:20,44526783
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11696196
0.87[YRI][hapmap]
rs13037894
0.85[ASN][1000 genomes]
rs3746500
0.85[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs4638862
0.87[YRI][hapmap]
rs61053751
0.95[ASN][1000 genomes]
rs73124781
0.85[ASN][1000 genomes]
rs73911122
0.95[ASN][1000 genomes]
rs73911123
0.95[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ACOT8
Distal transcriptional regulation
ZSWIM1
Distal transcriptional regulation
PCIF1
Distal transcriptional regulation
PLTP
Distal transcriptional regulation
CTSA
Distal transcriptional regulation
CTSA
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 5)
eQTL related gene
Source
SGK2
SCAN
DNTTIP1
SCAN
CTSA
SCAN
CTSA
SCAN
NEURL2
SCAN