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rVarBase
SNP Report
Basic Infomation
Name
rs7256672  
dbSNP
Location
chr:19,10579474
Allele
T/G
LD-proxy of rSNPs(r
2
>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10415088
0.86[ASN][1000 genomes]
rs11879191
0.91[CHB][hapmap]
rs12611227
0.83[CHB][hapmap]
rs12978984
0.85[CHB][hapmap]
rs12982179
0.91[CHB][hapmap]
rs1352426
0.82[CHB][hapmap]
rs2129944
0.83[CHB][hapmap]
rs60167376
0.82[ASN][1000 genomes]
rs62130736
0.82[ASN][1000 genomes]
rs7259088
0.95[ASN][1000 genomes]
rs7259385
0.87[ASN][1000 genomes]
rs74179926
0.88[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
PDE4A
Proximal transcriptional regulation
KEAP1
Distal transcriptional regulation
IMMT
Distal transcriptional regulation
PDE4A
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)