SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10791813	0.81[ASN][1000 genomes]
rs11227118	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11227120	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2282498	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs36057475	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3782094	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3802936	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs475089	0.95[ASN][1000 genomes]
rs7123226	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7943007	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs947799	0.97[ASN][1000 genomes]
rs9971546	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
VPS51	Proximal transcriptional regulation
ENSG00000187066	Proximal transcriptional regulation
SAC3D1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)