SNP Report
Basic Infomation
| Name | rs7127435 dbSNP |
|---|---|
| Location | chr:11,64291471 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 53)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10466694 | 1.00[EUR][1000 genomes] |
| rs11231799 | 0.86[ASN][1000 genomes] |
| rs11231802 | 0.80[ASN][1000 genomes] |
| rs11231806 | 1.00[EUR][1000 genomes] |
| rs11231865 | 1.00[EUR][1000 genomes] |
| rs11231866 | 1.00[EUR][1000 genomes] |
| rs11821081 | 1.00[EUR][1000 genomes] |
| rs1212539 | 1.00[EUR][1000 genomes] |
| rs1212851 | 1.00[EUR][1000 genomes] |
| rs12273948 | 1.00[EUR][1000 genomes] |
| rs12285139 | 1.00[ASN][1000 genomes] |
| rs12289479 | 1.00[ASN][1000 genomes] |
| rs12293573 | 1.00[EUR][1000 genomes] |
| rs17146100 | 1.00[EUR][1000 genomes] |
| rs1787671 | 1.00[EUR][1000 genomes] |
| rs2022049 | 1.00[EUR][1000 genomes] |
| rs2518908 | 1.00[EUR][1000 genomes] |
| rs2666561 | 1.00[EUR][1000 genomes] |
| rs2666562 | 1.00[EUR][1000 genomes] |
| rs2904961 | 1.00[EUR][1000 genomes] |
| rs2959651 | 1.00[EUR][1000 genomes] |
| rs3016758 | 1.00[EUR][1000 genomes] |
| rs41323046 | 1.00[EUR][1000 genomes] |
| rs475704 | 1.00[EUR][1000 genomes] |
| rs512926 | 1.00[EUR][1000 genomes] |
| rs516041 | 1.00[EUR][1000 genomes] |
| rs534073 | 1.00[EUR][1000 genomes] |
| rs535606 | 1.00[EUR][1000 genomes] |
| rs541305 | 1.00[EUR][1000 genomes] |
| rs545167 | 1.00[EUR][1000 genomes] |
| rs545819 | 1.00[EUR][1000 genomes] |
| rs546323 | 1.00[EUR][1000 genomes] |
| rs550930 | 1.00[EUR][1000 genomes] |
| rs553618 | 1.00[EUR][1000 genomes] |
| rs559095 | 1.00[EUR][1000 genomes] |
| rs559977 | 1.00[EUR][1000 genomes] |
| rs56186064 | 1.00[EUR][1000 genomes] |
| rs565688 | 1.00[EUR][1000 genomes] |
| rs573545 | 1.00[EUR][1000 genomes] |
| rs57371796 | 1.00[EUR][1000 genomes] |
| rs579175 | 1.00[EUR][1000 genomes] |
| rs58571986 | 1.00[EUR][1000 genomes] |
| rs6591855 | 1.00[CHB][hapmap];0.86[ASN][1000 genomes] |
| rs6591863 | 1.00[EUR][1000 genomes] |
| rs7110778 | 1.00[EUR][1000 genomes] |
| rs7112596 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
| rs73492139 | 1.00[EUR][1000 genomes] |
| rs73492140 | 1.00[EUR][1000 genomes] |
| rs73492144 | 1.00[EUR][1000 genomes] |
| rs73494206 | 1.00[EUR][1000 genomes] |
| rs7948607 | 1.00[EUR][1000 genomes] |
| rs9666331 | 1.00[EUR][1000 genomes] |
| rs9666856 | 1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000228732 | Distal transcriptional regulation |
| NRXN2 | Distal transcriptional regulation |
| ENSG00000237410 | Distal transcriptional regulation |
| PYGM | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014