SNP Report

Basic Infomation

Name	rs7101864 dbSNP
Location	chr:11,58053188
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10896760	0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs10896761	0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs10896771	0.80[ASN][1000 genomes]
rs10896772	0.80[ASN][1000 genomes]
rs11229304	0.88[CEU][hapmap];0.89[CHB][hapmap];0.93[JPT][hapmap];0.83[ASN][1000 genomes]
rs11229305	0.82[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs11229409	0.92[CHB][hapmap];0.93[JPT][hapmap];0.80[ASN][1000 genomes]
rs11229410	0.92[CHB][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.80[ASN][1000 genomes]
rs11229411	0.92[CHB][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.80[ASN][1000 genomes]
rs11229412	0.92[CHB][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.80[ASN][1000 genomes]
rs11229413	0.92[CHB][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.80[ASN][1000 genomes]
rs11229414	0.80[ASN][1000 genomes]
rs11229415	0.80[ASN][1000 genomes]
rs11229463	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs12271646	0.80[ASN][1000 genomes]
rs12275874	0.83[ASN][1000 genomes]
rs12279895	0.92[CHB][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.80[ASN][1000 genomes]
rs12280114	0.80[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs12285111	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs12575804	0.90[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs1893902	0.92[CHB][hapmap];0.93[JPT][hapmap]
rs1938637	0.92[CHB][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs1986404	0.92[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap]
rs2000486	0.83[CHB][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.89[MEX][hapmap];0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2186407	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4127353	0.92[CHB][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs4323891	0.92[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6591475	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs7926741	0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs7930778	0.83[ASW][hapmap];0.89[CEU][hapmap];0.92[CHB][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.87[MKK][hapmap];0.91[TSI][hapmap];0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 4)

eQTL related gene	Source
OR5AK2	SCAN
OR4A16	SCAN
OR4C15	SCAN
OR4D9	SCAN