SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11813474	0.83[YRI][hapmap]
rs17107487	0.87[ASW][hapmap];1.00[MEX][hapmap];0.86[YRI][hapmap]
rs6583806	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs6583808	0.81[ASW][hapmap]
rs7083650	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs724425	0.93[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73318098	0.86[AMR][1000 genomes]
rs7901728	0.83[YRI][hapmap]
rs7907691	1.00[ASW][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes]
rs7920742	1.00[ASW][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.93[YRI][hapmap]
rs7922855	0.86[AMR][1000 genomes]
rs9731967	0.81[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
MARCH5	Proximal transcriptional regulation
MARCH5	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)