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rVarBase
SNP Report
Basic Infomation
Name
rs11813474  
dbSNP
Location
chr:10,93874217
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11817048
1.00[AMR][1000 genomes]
rs58803861
0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60017701
0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61204062
0.90[AFR][1000 genomes]
rs61736268
1.00[AMR][1000 genomes]
rs6583806
0.93[AMR][1000 genomes]
rs7078569
0.87[AMR][1000 genomes]
rs7087060
0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7100640
0.83[YRI][hapmap]
rs724425
0.84[YRI][hapmap]
rs73318008
1.00[AMR][1000 genomes]
rs7920742
0.83[YRI][hapmap];1.00[AMR][1000 genomes]
rs7921368
1.00[AMR][1000 genomes]
rs9663787
1.00[AMR][1000 genomes]
rs9919492
0.93[YRI][hapmap];0.85[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000214549
Proximal transcriptional regulation
CPEB3
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)