SNP Report
Basic Infomation
| Name | rs695867 dbSNP |
|---|---|
| Location | chr:11,61561288 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11601892 | 0.83[EUR][1000 genomes] |
| rs12361868 | 1.00[AMR][1000 genomes];0.86[EUR][1000 genomes] |
| rs174534 | 1.00[YRI][hapmap] |
| rs174538 | 1.00[YRI][hapmap] |
| rs174570 | 1.00[YRI][hapmap] |
| rs174579 | 1.00[YRI][hapmap] |
| rs174585 | 1.00[YRI][hapmap] |
| rs174589 | 1.00[YRI][hapmap] |
| rs174605 | 1.00[YRI][hapmap] |
| rs174611 | 1.00[YRI][hapmap] |
| rs17831757 | 1.00[YRI][hapmap] |
| rs72920160 | 0.86[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| TMEM258 | Proximal transcriptional regulation |
| FEN1 | Proximal transcriptional regulation |
| MIR611 | Proximal transcriptional regulation |
| ENSG00000256428 | Proximal transcriptional regulation |
| INCENP | Distal transcriptional regulation |
| RAB3IL1 | Distal transcriptional regulation |
| FADS3 | Distal transcriptional regulation |
| BEST1 | Distal transcriptional regulation |
| FTH1 | Distal transcriptional regulation |
| ENSG00000269089 | Distal transcriptional regulation |
| ENSG00000124915 | Distal transcriptional regulation |
| MYRF | Distal transcriptional regulation |
| DAGLA | Distal transcriptional regulation |
| FEN1 | Distal transcriptional regulation |
| FADS1 | Distal transcriptional regulation |
| ENSG00000256914 | Distal transcriptional regulation |
| MIR1908 | Distal transcriptional regulation |
| FADS2 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 2)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014