SNP Report
Basic Infomation
| Name | rs6929847 dbSNP |
|---|---|
| Location | chr:6,90625659 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 18)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs13197987 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs13198989 | 1.00[ASN][1000 genomes] |
| rs13199026 | 1.00[ASN][1000 genomes] |
| rs13202132 | 0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs13206481 | 0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs13220655 | 0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs34775650 | 0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs35004638 | 0.99[EUR][1000 genomes] |
| rs35421650 | 0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs35837989 | 0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs36014049 | 1.00[ASN][1000 genomes] |
| rs56331762 | 0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs66535420 | 0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs66607651 | 0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6913036 | 1.00[ASN][1000 genomes] |
| rs6929363 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs71556355 | 1.00[ASN][1000 genomes] |
| rs72923980 | 1.00[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000232532 | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014