SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs13197987	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13202132	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13206481	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13220655	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34775650	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35421650	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35837989	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56331762	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs66535420	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs66607651	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6929363	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6929847	0.99[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000232532	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)