SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10896015	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1151496	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1194076	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1194077	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1194104	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12270054	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59286748	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
EHBP1L1	Proximal transcriptional regulation
KEAP1	Distal transcriptional regulation
C5orf42	Distal transcriptional regulation
NEAT1	Distal transcriptional regulation
MALAT1	Distal transcriptional regulation
ENSG00000270117	Distal transcriptional regulation
MAP3K11	Distal transcriptional regulation
PCNXL3	Distal transcriptional regulation
CFL1	Distal transcriptional regulation
MUS81	Distal transcriptional regulation
MIR4690	Distal transcriptional regulation
SIPA1	Distal transcriptional regulation
FOSL1	Distal transcriptional regulation
TM7SF2	Distal transcriptional regulation
SART1	Distal transcriptional regulation
C11orf68	Distal transcriptional regulation
DRAP1	Distal transcriptional regulation
VPS51	Distal transcriptional regulation
ENSG00000254501	Distal transcriptional regulation
SLC25A45	Distal transcriptional regulation
RELA	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)