SNP Report
| Name | rs67696533   dbSNP |
|---|---|
| Location | chr:20,31173362 |
| Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1022732 | 0.85[EUR][1000 genomes] |
| rs1555444 | 0.89[EUR][1000 genomes] |
| rs1555445 | 0.95[AMR][1000 genomes];0.94[EUR][1000 genomes] |
| rs159058 | 0.80[EUR][1000 genomes] |
| rs1810635 | 0.84[EUR][1000 genomes] |
| rs4578930 | 0.88[EUR][1000 genomes] |
| rs4911100 | 0.88[EUR][1000 genomes] |
| rs4911242 | 0.87[EUR][1000 genomes] |
| rs4911243 | 0.87[EUR][1000 genomes] |
| rs4911244 | 0.88[EUR][1000 genomes] |
| rs4911245 | 0.88[EUR][1000 genomes] |
| rs4911246 | 0.90[EUR][1000 genomes] |
| rs6057598 | 0.89[EUR][1000 genomes] |
| rs6057599 | 0.89[EUR][1000 genomes] |
| rs6058746 | 0.89[EUR][1000 genomes] |
| rs6087941 | 0.90[EUR][1000 genomes] |
| rs6119267 | 0.85[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs6119269 | 0.89[EUR][1000 genomes] |
| rs6119893 | 0.84[EUR][1000 genomes] |
| rs6119909 | 0.88[EUR][1000 genomes] |
| rs6141319 | 0.83[EUR][1000 genomes] |
| rs7267720 | 0.89[EUR][1000 genomes] |
| rs911526 | 0.88[EUR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| C20orf112 | Proximal transcriptional regulation |
| ENSG00000204393 | Proximal transcriptional regulation |
| C20orf112 | Distal transcriptional regulation |
| DNMT3B | Distal transcriptional regulation |
| ENSG00000233293 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




