SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10797088	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11587040	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12080285	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12740520	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1855186	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2184064	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs3953093	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6427559	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6694743	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6703062	0.83[EUR][1000 genomes]
rs7516660	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000198358	RNA binding protein mediated regulation
ITLN2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)