SNP Report

Basic Infomation

Name	rs6454799 dbSNP
Location	chr:6,90798864
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 29)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs16882480	1.00[CEU][hapmap]
rs3734661	1.00[CEU][hapmap]
rs4053599	1.00[CEU][hapmap]
rs4707582	1.00[CEU][hapmap]
rs6454800	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6901683	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6919937	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs6931671	1.00[CEU][hapmap]
rs6940143	1.00[CEU][hapmap]
rs7452686	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7739280	1.00[CEU][hapmap]
rs7744774	1.00[CEU][hapmap]
rs7765125	1.00[CEU][hapmap]
rs9362703	1.00[CEU][hapmap]
rs9444735	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9444739	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9444743	1.00[EUR][1000 genomes]
rs9451325	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9451326	1.00[EUR][1000 genomes]
rs9451327	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9451328	1.00[EUR][1000 genomes]
rs9451329	1.00[EUR][1000 genomes]
rs9451331	1.00[EUR][1000 genomes]
rs9451336	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9451337	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9451340	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9451350	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9451352	1.00[CEU][hapmap];0.89[AMR][1000 genomes]
rs9451360	1.00[CEU][hapmap];1.00[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
BACH2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)