Home
Search
List search
Advanced Search
Data content
Tutorial
About Us
Feedback
rVarBase
SNP Report
Basic Infomation
Name
rs61740228  
dbSNP
Location
chr:11,64665444
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 11)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12293826
0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2904963
1.00[AMR][1000 genomes]
rs601047
0.89[AMR][1000 genomes]
rs601805
0.89[AMR][1000 genomes]
rs606412
0.89[AMR][1000 genomes]
rs606974
0.89[AMR][1000 genomes]
rs630585
0.89[AMR][1000 genomes]
rs632555
0.89[AMR][1000 genomes]
rs677805
0.89[AMR][1000 genomes]
rs684250
0.89[AMR][1000 genomes]
rs7113740
0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ATG2A
Proximal transcriptional regulation
ENSG00000229719
Proximal transcriptional regulation
ATG2A
Distal transcriptional regulation
PPP2R5B
Distal transcriptional regulation
ARL2
Distal transcriptional regulation
SNX15
Distal transcriptional regulation
ATG2A
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)