SNP Report
Name | rs6124751   dbSNP |
---|---|
Location | chr:20,44494503 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1045493 | 0.92[AMR][1000 genomes];0.87[ASN][1000 genomes] |
rs11699781 | 0.89[AMR][1000 genomes] |
rs11907982 | 0.83[AMR][1000 genomes] |
rs1967656 | 0.87[AMR][1000 genomes] |
rs2868359 | 0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs2868360 | 0.93[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2868362 | 0.86[AMR][1000 genomes] |
rs3746497 | 0.86[AMR][1000 genomes] |
rs3761154 | 0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6094218 | 0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6094224 | 0.86[AMR][1000 genomes] |
rs6104372 | 0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs6104375 | 0.88[AMR][1000 genomes];0.87[ASN][1000 genomes] |
rs6104376 | 0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs6104378 | 0.90[AMR][1000 genomes];0.80[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6104379 | 0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6104380 | 0.86[AMR][1000 genomes] |
rs6104383 | 0.92[AMR][1000 genomes];0.87[ASN][1000 genomes] |
rs6104384 | 0.92[AMR][1000 genomes];0.87[ASN][1000 genomes] |
rs6104385 | 0.89[AMR][1000 genomes] |
rs6104387 | 0.86[AMR][1000 genomes] |
rs6124752 | 0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6130947 | 0.83[ASN][1000 genomes] |
rs6130950 | 0.93[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6130951 | 0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6130953 | 0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs6130954 | 0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs6130955 | 0.87[AMR][1000 genomes] |
rs6130956 | 0.85[AMR][1000 genomes] |
rs6130957 | 0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs6130958 | 0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs6130959 | 0.94[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs6514066 | 0.81[AMR][1000 genomes];0.87[ASN][1000 genomes] |
rs722669 | 0.87[AMR][1000 genomes] |
rs7268221 | 0.86[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
PCIF1 | Distal transcriptional regulation |
ACOT8 | Distal transcriptional regulation |
ZSWIM3 | Distal transcriptional regulation |
ZSWIM3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014