SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 22)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs55677103	1.00[EUR][1000 genomes]
rs6119259	1.00[EUR][1000 genomes]
rs6119263	1.00[EUR][1000 genomes]
rs6119268	1.00[EUR][1000 genomes]
rs6119871	1.00[CEU][hapmap]
rs6119882	1.00[CEU][hapmap];0.84[YRI][hapmap];0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6119892	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6119895	1.00[CEU][hapmap]
rs6119898	1.00[EUR][1000 genomes]
rs6119906	1.00[EUR][1000 genomes]
rs61433383	0.89[EUR][1000 genomes]
rs62208014	0.89[EUR][1000 genomes]
rs62208017	1.00[EUR][1000 genomes]
rs62208018	1.00[EUR][1000 genomes]
rs62208046	1.00[EUR][1000 genomes]
rs62208047	1.00[EUR][1000 genomes]
rs62208048	1.00[EUR][1000 genomes]
rs6579021	1.00[CEU][hapmap];1.00[GIH][hapmap]
rs6579025	1.00[EUR][1000 genomes]
rs7266448	1.00[EUR][1000 genomes]
rs7362992	1.00[CEU][hapmap]
rs8119624	1.00[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
C20orf112	Distal transcriptional regulation
C20orf112	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)