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rVarBase
SNP Report
Basic Infomation
Name
rs6103955  
dbSNP
Location
chr:20,43629046
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 11)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1210851
1.00[CEU][hapmap]
rs17333103
1.00[CHB][hapmap]
rs2267858
1.00[LWK][hapmap]
rs6073574
1.00[CEU][hapmap]
rs6073652
1.00[CHD][hapmap];1.00[MEX][hapmap]
rs6094061
1.00[CEU][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap]
rs6094095
1.00[CHD][hapmap]
rs6124691
1.00[CEU][hapmap]
rs6130753
1.00[LWK][hapmap]
rs6130759
1.00[LWK][hapmap]
rs927000
1.00[LWK][hapmap]
rSNP related genes
Symbol
Regulation type
ENSG00000252021
Proximal transcriptional regulation
STK4
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)