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rVarBase
SNP Report
Basic Infomation
Name
rs6094061  
dbSNP
Location
chr:20,43571802
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1210851
1.00[CEU][hapmap]
rs2267858
1.00[LWK][hapmap]
rs6073574
1.00[CEU][hapmap]
rs6073652
1.00[MEX][hapmap]
rs6103955
1.00[CEU][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap]
rs6124691
1.00[CEU][hapmap]
rs6130753
1.00[LWK][hapmap]
rs6130759
1.00[LWK][hapmap]
rs927000
1.00[LWK][hapmap]
rSNP related genes
Symbol
Regulation type
PABPC1L
Distal transcriptional regulation
TOMM34
Distal transcriptional regulation
PABPC1L
RNA binding protein mediated regulation
TOMM34
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)