SNP Report
Name | rs6089971   dbSNP |
---|---|
Location | chr:20,62385846 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1151622 | 0.81[AMR][1000 genomes] |
rs1151624 | 0.81[AMR][1000 genomes] |
rs11696871 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12053646 | 0.93[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs12481497 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13041528 | 0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1887406 | 0.89[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs2236510 | 0.81[AMR][1000 genomes] |
rs2256814 | 0.84[AMR][1000 genomes] |
rs2281926 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2427533 | 0.81[AMR][1000 genomes] |
rs2427534 | 0.81[AMR][1000 genomes] |
rs4809334 | 0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6089970 | 0.91[AMR][1000 genomes] |
rs73622886 | 0.91[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs73622887 | 0.86[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs914559 | 0.81[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
SLC2A4RG | Distal transcriptional regulation |
ZBTB46 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014