SNP Report
Name | rs6087816   dbSNP |
---|---|
Location | chr:20,30688844 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11906975 | 1.00[ASN][1000 genomes] |
rs17093823 | 1.00[ASN][1000 genomes] |
rs2143764 | 1.00[CEU][hapmap];0.81[EUR][1000 genomes] |
rs2295037 | 0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs2297304 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs2297305 | 1.00[ASN][1000 genomes] |
rs3813922 | 0.88[YRI][hapmap] |
rs4911544 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes] |
rs59705005 | 0.81[ASN][1000 genomes] |
rs60000242 | 1.00[ASN][1000 genomes] |
rs6087820 | 1.00[CEU][hapmap] |
rs6087828 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6087841 | 1.00[CEU][hapmap] |
rs6089158 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs6089177 | 1.00[CEU][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6089184 | 0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs6089194 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6089195 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6089197 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.88[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6089206 | 0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6089208 | 0.81[EUR][1000 genomes] |
rs6119761 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs6121330 | 0.97[ASN][1000 genomes] |
rs6121331 | 0.97[ASN][1000 genomes] |
rs6121335 | 1.00[ASN][1000 genomes] |
rs6121350 | 0.90[AFR][1000 genomes];0.95[AMR][1000 genomes] |
rs6121351 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs6121353 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs6121356 | 0.86[AFR][1000 genomes];0.81[AMR][1000 genomes] |
rs6121360 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6121361 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6121362 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6121363 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6121375 | 1.00[CEU][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6121376 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.92[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6121377 | 0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs7354349 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs73906746 | 0.85[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs910186 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
HCK | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014