SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 10)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs35774078	0.84[EUR][1000 genomes]
rs36064831	1.00[EUR][1000 genomes]
rs56406248	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60543770	0.92[EUR][1000 genomes]
rs61265760	1.00[EUR][1000 genomes]
rs7022785	1.00[EUR][1000 genomes]
rs7037079	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73670273	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73670282	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73670288	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
C9orf163	Proximal transcriptional regulation
ENSG00000221693	Distal transcriptional regulation
EGFL7	Distal transcriptional regulation
AGPAT2	Distal transcriptional regulation
FAM69B	Distal transcriptional regulation
ENSG00000267845	Distal transcriptional regulation
GPSM1	Distal transcriptional regulation
SNAPC4	Distal transcriptional regulation
SDCCAG3	Distal transcriptional regulation
PMPCA	Distal transcriptional regulation
INPP5E	Distal transcriptional regulation
NOTCH1	Distal transcriptional regulation
ENSG00000237886	Distal transcriptional regulation
MIR4674	Distal transcriptional regulation
MIR4673	Distal transcriptional regulation
TMEM141	Distal transcriptional regulation
ENSG00000201524	Distal transcriptional regulation
ING5	Distal transcriptional regulation
ENSG00000227512	Distal transcriptional regulation
SNORA17	Distal transcriptional regulation
SNHG7	Distal transcriptional regulation
C9orf163	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)