SNP Report
Basic Infomation
| Name | rs35774078 dbSNP |
|---|---|
| Location | chr:9,139326959 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 17)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11545501 | 0.94[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs36064831 | 0.84[EUR][1000 genomes] |
| rs55913234 | 0.86[EUR][1000 genomes] |
| rs56406248 | 0.84[EUR][1000 genomes] |
| rs59287188 | 0.86[EUR][1000 genomes] |
| rs60543770 | 1.00[ASN][1000 genomes] |
| rs60640016 | 0.84[EUR][1000 genomes] |
| rs61265760 | 0.84[EUR][1000 genomes] |
| rs7022785 | 0.84[EUR][1000 genomes] |
| rs7037079 | 0.84[EUR][1000 genomes] |
| rs73566906 | 1.00[ASN][1000 genomes] |
| rs73566911 | 0.86[EUR][1000 genomes] |
| rs73568519 | 1.00[ASN][1000 genomes] |
| rs73670253 | 0.86[EUR][1000 genomes] |
| rs73670273 | 0.84[EUR][1000 genomes] |
| rs73670282 | 0.84[EUR][1000 genomes] |
| rs73670288 | 0.84[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000263931 | Distal transcriptional regulation |
| ENSG00000266411 | Distal transcriptional regulation |
| INPP5E | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014