SNP Report

Basic Infomation

Name	rs6058522 dbSNP
Location	chr:20,30645959
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11699606	0.82[EUR][1000 genomes]
rs17093827	1.00[CHB][hapmap]
rs17349892	0.86[CEU][hapmap];0.81[TSI][hapmap]
rs2297303	1.00[CHB][hapmap]
rs242607	1.00[CHB][hapmap]
rs242608	1.00[CHB][hapmap]
rs6061187	1.00[CHB][hapmap]
rs6061195	1.00[CHB][hapmap]
rs6087809	1.00[CHB][hapmap]
rs6121325	0.83[EUR][1000 genomes]
rs6579316	0.93[CEU][hapmap]
rs6579317	0.93[CEU][hapmap]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 2)