SNP Report

Basic Infomation

Name	rs6057539 dbSNP
Location	chr:20,30807344
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1056777	0.80[AFR][1000 genomes]
rs17123073	0.92[AFR][1000 genomes]
rs17123085	0.86[AFR][1000 genomes]
rs17123088	0.97[AFR][1000 genomes]
rs41288634	0.97[AFR][1000 genomes]
rs58400008	0.99[AFR][1000 genomes]
rs58436169	0.99[AFR][1000 genomes]
rs6058547	0.82[AFR][1000 genomes]
rs6058559	0.99[AFR][1000 genomes]
rs6058560	0.84[AFR][1000 genomes]
rs6058561	0.99[AFR][1000 genomes]
rs6058562	0.99[AFR][1000 genomes]
rs6058564	0.99[AFR][1000 genomes]
rs6058565	0.99[AFR][1000 genomes]
rs6058568	0.86[AFR][1000 genomes]
rs6058570	0.85[AFR][1000 genomes]
rs6058571	0.97[AFR][1000 genomes]
rs6058573	0.97[AFR][1000 genomes]
rs6058576	0.97[AFR][1000 genomes]
rs6061226	0.99[AFR][1000 genomes]
rs6061228	0.99[AFR][1000 genomes]
rs6061229	0.93[AFR][1000 genomes]
rs6579005	0.97[AFR][1000 genomes]
rs7273131	0.97[AFR][1000 genomes]
rs7274357	0.87[AFR][1000 genomes]
rs7274665	0.86[AFR][1000 genomes]
rs73235294	0.87[AFR][1000 genomes]
rs73235295	0.87[AFR][1000 genomes]
rs73235301	0.87[AFR][1000 genomes]
rs73237210	0.99[AFR][1000 genomes]
rs73237211	0.99[AFR][1000 genomes]
rs73903573	0.84[AFR][1000 genomes]
rs8122133	0.90[AFR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)