SNP Report

Basic Infomation

Name	rs6032502 dbSNP
Location	chr:20,44377455
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 36)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1487325	0.82[YRI][hapmap]
rs2144180	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35492126	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56729606	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57030583	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57894159	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6017651	1.00[AMR][1000 genomes]
rs6017690	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6017691	0.92[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6032450	1.00[AMR][1000 genomes]
rs6032452	1.00[AMR][1000 genomes]
rs6032519	0.92[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6032522	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6032525	0.91[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60744141	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7272593	0.91[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73291467	1.00[AMR][1000 genomes]
rs73306409	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73306418	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73306424	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73306432	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73306445	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73306449	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73306452	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73306471	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73306476	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73306480	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73306481	0.83[AFR][1000 genomes]
rs73306483	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73306486	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73308406	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73308414	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8114118	0.82[YRI][hapmap]
rs8122973	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8123134	0.91[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8123196	0.91[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
SPINT5P	Proximal transcriptional regulation
HNRNPA1P3	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)