SNP Report
Basic Infomation
| Name | rs59249132 dbSNP |
|---|---|
| Location | chr:1,155353438 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10157264 | 0.83[AFR][1000 genomes] |
| rs10158907 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs13373934 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs13375289 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28516425 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28850118 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs57665266 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs58932176 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs59445713 | 1.00[AMR][1000 genomes] |
| rs60137217 | 1.00[AMR][1000 genomes] |
| rs61103093 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs61425508 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs61518562 | 0.83[AFR][1000 genomes] |
| rs6664370 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs6673172 | 1.00[AMR][1000 genomes] |
| rs7519697 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ASH1L | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014