SNP Report

Basic Infomation

Name	rs57682906 dbSNP
Location	chr:2,103108713
Allele	C/A

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10172116	0.80[ASN][1000 genomes]
rs10208027	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11887071	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11892768	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12053191	1.00[EUR][1000 genomes]
rs12053526	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13030642	0.80[ASN][1000 genomes]
rs13030675	0.80[ASN][1000 genomes]
rs1403552	0.80[ASN][1000 genomes]
rs28696001	1.00[EUR][1000 genomes]
rs2871478	1.00[EUR][1000 genomes]
rs3806580	1.00[EUR][1000 genomes]
rs57150829	1.00[EUR][1000 genomes]
rs59038885	1.00[EUR][1000 genomes]
rs59642933	1.00[EUR][1000 genomes]
rs59771371	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60883579	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61086489	1.00[EUR][1000 genomes]
rs61731285	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6543156	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6543172	1.00[EUR][1000 genomes]
rs6543173	1.00[EUR][1000 genomes]
rs6755047	1.00[EUR][1000 genomes]
rs72997648	1.00[EUR][1000 genomes]
rs72997651	1.00[EUR][1000 genomes]
rs73944370	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73944371	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7576791	1.00[EUR][1000 genomes]
rs7579104	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7579846	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7596181	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SLC9A4	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)