SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs13040315	0.96[ASN][1000 genomes]
rs2297195	0.94[ASN][1000 genomes]
rs34293711	0.98[ASN][1000 genomes]
rs3737063	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3746504	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3859611	0.97[ASN][1000 genomes]
rs55851513	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73622629	0.86[EUR][1000 genomes]
rs73622634	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73622635	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73622636	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs73622638	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZNF335	Proximal transcriptional regulation
NEURL2	Distal transcriptional regulation
CTSA	Distal transcriptional regulation
PCIF1	Distal transcriptional regulation
ENSG00000204044	Distal transcriptional regulation
ENSG00000203346	Distal transcriptional regulation
ZSWIM1	Distal transcriptional regulation
NCOA5	Distal transcriptional regulation
ACOT8	Distal transcriptional regulation
ZSWIM3	Distal transcriptional regulation
ZNF335	Distal transcriptional regulation
SLC35C2	Distal transcriptional regulation
SLC12A5	Distal transcriptional regulation
ENSG00000240742	Distal transcriptional regulation
ZNF335	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)