SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11168332	0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12426835	0.81[AMR][1000 genomes]
rs2898045	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4237856	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4307775	0.81[AMR][1000 genomes]
rs4344559	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4366552	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4417373	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4494361	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4760606	0.82[ASN][1000 genomes]
rs740025	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
TMEM106C	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)