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rVarBase
SNP Report
Basic Infomation
Name
rs57290985  
dbSNP
Location
chr:11,63930155
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12274687
1.00[EUR][1000 genomes]
rs167658
1.00[EUR][1000 genomes]
rs57155426
1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs576548
1.00[EUR][1000 genomes]
rs59587183
1.00[EUR][1000 genomes]
rs59830440
1.00[EUR][1000 genomes]
rs60466708
1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs61246275
1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs61761266
1.00[EUR][1000 genomes]
rs61761275
1.00[EUR][1000 genomes]
rs61761277
1.00[EUR][1000 genomes]
rs61761284
1.00[EUR][1000 genomes]
rs633561
1.00[EUR][1000 genomes]
rs6591834
0.91[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
STIP1
Distal transcriptional regulation
MACROD1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)