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rVarBase
SNP Report
Basic Infomation
Name
rs56758452  
dbSNP
Location
chr:10,82196731
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10509414
1.00[EUR][1000 genomes]
rs17105023
0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3802639
1.00[EUR][1000 genomes]
rs58082336
1.00[EUR][1000 genomes]
rs59137417
0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs59140600
1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs60262537
1.00[EUR][1000 genomes]
rs60771270
1.00[EUR][1000 genomes]
rs7085379
1.00[EUR][1000 genomes]
rs7093922
1.00[EUR][1000 genomes]
rs74143116
0.96[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs74143117
0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs74143135
1.00[EUR][1000 genomes]
rs74143136
1.00[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
FAM213A
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)