SNP Report

Basic Infomation

Name	rs562172 dbSNP
Location	chr:11,61626167
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs3741	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs472031	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs482548	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs500850	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs508768	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs518511	0.95[EUR][1000 genomes]
rs520298	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs546747	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs639394	0.95[EUR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)