SNP Report

Basic Infomation

Name	rs55641549 dbSNP
Location	chr:1,155312182
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 22)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10158037	0.80[AFR][1000 genomes]
rs13375379	0.83[AFR][1000 genomes]
rs16836851	0.81[AFR][1000 genomes]
rs28438500	0.87[AFR][1000 genomes]
rs56770523	0.86[AFR][1000 genomes]
rs57134822	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57807227	0.81[AFR][1000 genomes]
rs57862851	1.00[AMR][1000 genomes]
rs58471239	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58647953	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58850753	0.86[AFR][1000 genomes]
rs6659913	0.84[AFR][1000 genomes]
rs6670530	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6671191	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73008931	0.85[AFR][1000 genomes]
rs73008999	0.84[AFR][1000 genomes]
rs73010906	0.81[AFR][1000 genomes]
rs73010909	0.82[AFR][1000 genomes]
rs73010921	0.81[AFR][1000 genomes]
rs7517139	0.84[AFR][1000 genomes]
rs7517777	0.81[AFR][1000 genomes]
rs7523189	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)