SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs2297903	0.92[CEU][hapmap];0.85[GIH][hapmap];0.91[TSI][hapmap];0.88[EUR][1000 genomes]
rs2297904	1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs3767499	0.96[CEU][hapmap];0.85[TSI][hapmap];0.83[AMR][1000 genomes]
rs3767500	0.83[AMR][1000 genomes]
rs3767503	0.96[CEU][hapmap];0.91[MEX][hapmap];0.89[TSI][hapmap];0.96[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3767504	0.96[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4915474	0.96[CEU][hapmap];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs55922503	0.88[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ASCL5	Distal transcriptional regulation
CACNA1S	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)