Home
Search
List search
Advanced Search
Data content
Tutorial
About Us
Feedback
rVarBase
SNP Report
Basic Infomation
Name
rs2297904  
dbSNP
Location
chr:1,201030668
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12046840
0.88[YRI][hapmap]
rs12048771
0.80[YRI][hapmap]
rs16847613
1.00[CEU][hapmap];0.86[TSI][hapmap];0.87[EUR][1000 genomes]
rs4915475
1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs55922503
0.96[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ASCL5
Distal transcriptional regulation
CACNA1S
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)