SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10494827	0.84[CHD][hapmap]
rs2297903	0.89[CEU][hapmap];0.81[TSI][hapmap];0.81[EUR][1000 genomes]
rs2297906	0.81[CEU][hapmap]
rs3767499	1.00[CEU][hapmap];0.88[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap];0.84[MEX][hapmap];0.95[TSI][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3767500	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3767504	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4915474	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4915475	0.96[CEU][hapmap];0.91[MEX][hapmap];0.89[TSI][hapmap];0.96[AMR][1000 genomes];0.83[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CACNA1S	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)