SNP Report
Basic Infomation
| Name | rs4915219 dbSNP |
|---|---|
| Location | chr:1,201164930 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 20)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10753896 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs10753897 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs10920144 | 1.00[ASN][1000 genomes] |
| rs17576470 | 1.00[LWK][hapmap] |
| rs2039959 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs3738268 | 1.00[CHB][hapmap] |
| rs4396148 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs4488061 | 1.00[ASN][1000 genomes] |
| rs4915224 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs4915490 | 1.00[CEU][hapmap] |
| rs4915497 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs6427885 | 1.00[ASN][1000 genomes] |
| rs6427886 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs6667020 | 1.00[ASN][1000 genomes] |
| rs6692846 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs832157 | 1.00[ASN][1000 genomes] |
| rs832158 | 1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs832159 | 1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs832169 | 1.00[LWK][hapmap] |
| rs832170 | 1.00[LWK][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| IGFN1 | Distal transcriptional regulation |
| IGFN1 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014