SNP Report

Basic Infomation

Name	rs491231 dbSNP
Location	chr:11,63525258
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 93)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10501394	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11231543	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11551942	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11551944	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11820129	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1186941	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12274980	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17158453	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17656941	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1789219	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2509744	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2959876	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2959880	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2959881	0.84[EUR][1000 genomes]
rs2959886	0.97[EUR][1000 genomes]
rs3016865	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34109368	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35345497	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs476034	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs476691	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs482915	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs500726	0.98[EUR][1000 genomes]
rs500991	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs511819	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs517700	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs518490	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs518692	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs521464	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs523093	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs534505	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs534876	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs539306	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs541809	0.92[EUR][1000 genomes]
rs550629	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs551466	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs559405	0.94[EUR][1000 genomes]
rs560938	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs562549	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs567756	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs568769	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs568790	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs580695	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs588523	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928162	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928163	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928165	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928166	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928167	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928168	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928195	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928196	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928197	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928202	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928203	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928204	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928205	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928206	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928208	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928209	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928211	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928212	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928214	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928234	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928236	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928237	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928238	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928239	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928241	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928243	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928244	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928245	0.93[EUR][1000 genomes]
rs61928246	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928247	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61928248	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61929731	0.81[EUR][1000 genomes]
rs6591821	0.95[EUR][1000 genomes]
rs6591822	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7106670	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7111395	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7117206	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7119961	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7127454	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7128970	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7928900	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7931908	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7932117	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7939940	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7943981	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7944003	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7944094	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7945972	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7949389	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7949447	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
RTN3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)