SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 21)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10139199	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1051533	0.87[GIH][hapmap]
rs11851414	0.87[GIH][hapmap]
rs12147199	1.00[ASN][1000 genomes]
rs12147461	1.00[ASN][1000 genomes]
rs1898320	1.00[ASN][1000 genomes]
rs194732	0.85[CEU][hapmap];0.84[GIH][hapmap]
rs194745	0.89[YRI][hapmap]
rs2164627	1.00[ASN][1000 genomes]
rs4899261	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4899262	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902649	1.00[ASN][1000 genomes]
rs55885232	1.00[ASN][1000 genomes]
rs58638884	1.00[ASN][1000 genomes]
rs72731537	1.00[ASN][1000 genomes]
rs72731539	1.00[ASN][1000 genomes]
rs72731554	1.00[ASN][1000 genomes]
rs72731565	1.00[ASN][1000 genomes]
rs73279198	0.92[AFR][1000 genomes]
rs8019383	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9671648	0.86[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZFYVE26	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 3)