SNP Report

Basic Infomation

Name	rs4845402 dbSNP
Location	chr:1,154977929
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1061122	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10908443	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11264302	1.00[JPT][hapmap]
rs11264303	1.00[JPT][hapmap]
rs11465207	1.00[CHB][hapmap]
rs11582128	1.00[JPT][hapmap]
rs12058480	1.00[CHB][hapmap]
rs1218554	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1218584	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1218585	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1218587	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1218589	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12760148	1.00[CHB][hapmap]
rs1611770	1.00[JPT][hapmap]
rs1611772	1.00[CHB][hapmap]
rs16836525	1.00[CHB][hapmap]
rs2878412	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4845396	1.00[CHB][hapmap]
rs4845397	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4845700	0.85[CEU][hapmap]
rs6660884	1.00[JPT][hapmap]
rs6682335	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs906596	1.00[CHB][hapmap]
rs906597	1.00[CHB][hapmap]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 5)

eQTL related gene	Source
ANXA9	SCAN
PIP5K1A	SCAN
LCE1F	SCAN
LENEP	SCAN
MTX1	SCAN