SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10456237	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2446485	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2446486	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2446488	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4340995	0.93[EUR][1000 genomes]
rs55857346	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6904648	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7773973	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9350320	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9465963	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9986401	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)