Home
Search
List search
Advanced Search
Data content
Tutorial
About Us
Feedback
rVarBase
SNP Report
Basic Infomation
Name
rs4340112  
dbSNP
Location
chr:12,48338746
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 11)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10783222
1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10783223
0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11168325
0.82[CEU][hapmap]
rs12423645
1.00[JPT][hapmap]
rs12426774
1.00[JPT][hapmap]
rs12810487
1.00[JPT][hapmap]
rs12815308
1.00[JPT][hapmap]
rs12818241
1.00[JPT][hapmap]
rs4073726
0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4459375
0.82[EUR][1000 genomes]
rs7970376
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
VDR
Proximal transcriptional regulation
VDR
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)