SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 6)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs2959880	0.83[CEU][hapmap]
rs4405320	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56364222	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs568790	0.83[CEU][hapmap]
rs7116486	1.00[CEU][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7944240	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
PLA2G16	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 2)

eQTL related gene	Source
SNORA57	SCAN
GNG3	SCAN